- generateNonVecFuns
string generateNonVecFuns()
Undocumented in source. Be warned that the author may not have intended to support it.
- generateNonVecTraceFuns
string generateNonVecTraceFuns()
Undocumented in source. Be warned that the author may not have intended to support it.
- generateVecFuns
string generateVecFuns()
Undocumented in source. Be warned that the author may not have intended to support it.
- generateVecTraceFuns
string generateVecTraceFuns()
Undocumented in source. Be warned that the author may not have intended to support it.
- parasail_cigar_decode
char* parasail_cigar_decode(parasail_cigar_t* cigar)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_cigar_decode_len
uint parasail_cigar_decode_len(uint cigar_int)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_cigar_decode_op
char parasail_cigar_decode_op(uint cigar_int)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_cigar_free
void parasail_cigar_free(parasail_cigar_t* cigar)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_matrix_create
parasail_matrix_t* parasail_matrix_create(char* alphabet, int match, int mismatch)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_matrix_free
void parasail_matrix_free(parasail_matrix_t* matrix)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_matrix_lookup
parasail_matrix_t* parasail_matrix_lookup(char* matrix)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_matrix_set_value
void parasail_matrix_set_value(parasail_matrix_t* matrix, int row, int col, int value)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_free
void parasail_result_free(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_get_cigar
parasail_cigar_t* parasail_result_get_cigar(parasail_result_t* result, char* seqA, int lena, char* seqB, int lenb, parasail_matrix_t* matrix)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_get_end_query
int parasail_result_get_end_query(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_get_end_ref
int parasail_result_get_end_ref(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_get_length
int parasail_result_get_length(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_get_length_col
int* parasail_result_get_length_col(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_get_length_row
int* parasail_result_get_length_row(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_get_length_table
int* parasail_result_get_length_table(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_get_matches
int parasail_result_get_matches(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_get_matches_col
int* parasail_result_get_matches_col(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_get_matches_row
int* parasail_result_get_matches_row(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_get_matches_table
int* parasail_result_get_matches_table(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_get_score
int parasail_result_get_score(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_get_score_col
int* parasail_result_get_score_col(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_get_score_row
int* parasail_result_get_score_row(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_get_score_table
int* parasail_result_get_score_table(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_get_similar
int parasail_result_get_similar(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_get_similar_col
int* parasail_result_get_similar_col(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_get_similar_row
int* parasail_result_get_similar_row(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_get_similar_table
int* parasail_result_get_similar_table(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_get_trace_del_table
int* parasail_result_get_trace_del_table(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_get_trace_ins_table
int* parasail_result_get_trace_ins_table(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_get_trace_table
int* parasail_result_get_trace_table(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_is_banded
int parasail_result_is_banded(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_is_blocked
int parasail_result_is_blocked(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_is_diag
int parasail_result_is_diag(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_is_nw
int parasail_result_is_nw(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_is_rowcol
int parasail_result_is_rowcol(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_is_saturated
int parasail_result_is_saturated(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_is_scan
int parasail_result_is_scan(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_is_sg
int parasail_result_is_sg(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_is_stats
int parasail_result_is_stats(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_is_stats_rowcol
int parasail_result_is_stats_rowcol(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_is_stats_table
int parasail_result_is_stats_table(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_is_striped
int parasail_result_is_striped(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_is_sw
int parasail_result_is_sw(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_is_table
int parasail_result_is_table(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_result_is_trace
int parasail_result_is_trace(parasail_result_t* result)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_traceback_generic
void parasail_traceback_generic(char* seqA, int lena, char* seqB, int lenb, char* nameA, char* nameB, parasail_matrix_t* matrix, parasail_result_t* result, char match, char pos, char neg, int width, int name_width, int use_stats)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.
- parasail_traceback_generic_extra
void parasail_traceback_generic_extra(char* seqA, int lena, char* seqB, int lenb, char* nameA, char* nameB, parasail_matrix_t* matrix, parasail_result_t* result, char match, char pos, char neg, int width, int name_width, int use_stats, int int_width, FILE* stream)
Undocumented in source but is binding to C. You might be able to learn more by searching the web for its name.